Genome Assembly HiC

Take Your Genome from Draft to Reference Quality

Get more from your next-generation sequencing data with the Arima Hi-C for high-quality, phased genome assemblies.

• Efficient Workflow: Fast and user-friendly workflow to go from sample to Hi-C library in 6 hours.

• Flexible Analyses: Compatible with the latest assembly and scaffolding pipelines.

• Proven Performance: Quality trusted by large consortia, so you can focus on genome biolgogy.

Benefits of the Arima Hi-C Workflow for Genome Assembly

• - Utilize a variety of sample types including plant tissue, cell culture, vertebrate tissue samples, and invertebrates.

• - Quality you can trust, with built-in QC steps to ensure you get reliable sequencing results every time.

• - Use the 8 reaction kit to get started or the 48 reaction kit for high-volume projects.

Product Specifications

Sample Type:

•  Tissue, blood, cell lines, whole insects, plants​

Sample Input:

• Standard Input: ~1ug DNA ​

• Low Input: less than 750ng DNA​

Library Complexity:

• 1 reaction provides libraries complex enough for 600M reads

Reads:

• <200M reads, typically 50-75M reads per 1 Gb of genome

Sequencing Depth:

• Arima-HiC: 15-60X, depending on the contig NG50

Compatible Sequencer:

• Illumina sequencing platforms

Bioinformatics: 

• SALSA

Catalog #: A303011

Please email us at cs@medikonia.com for any enquiry. To place an order, please include the catalog number(s) of the product(s) in the email.

Sample Prep

Arima High Coverage HiC Kit - User Guide for Plant Tissues

Arima High Coverage HiC Kit - User Guide for Nucleated Blood

Arima High Coverage HiC Kit - User Guide for Mammalian Cell Lines

Arima High Coverage HiC Kit - User Guide for Mammalian Blood

Arima High Coverage HiC Kit - User Guide for Animal Tissues

Library Prep

Arima Library Prep Module - User Guide: Library Preparation for Arima High Coverage HiC Kit

QC Worksheet

Worksheet: Arima High Coverage HiC Quality Control

Bioinformatics

Arima-HiC+/Arima-High Coverage HiC Kit -- Arima-HiC Bioinformatics User Guide

Application Brochure

Discover the Power of 3D Genomics for Genome Assembly 

Product Flyer

The Arima HiC Kit and Service for Chromosome Spanning Assemblies